#Head information NAME 2aa0 TYPE alpha-alpha REPRESENTATIVE 1cdg_231 MEMBERS 5 CLUSTER 1 #Loop element > 1cdg_231 .vkhMPfgwqksfmaavn... 2aa0_0.pdb 0 > 1amg_195 .vrgYApervnswmtds.... 2aa0_1.pdb 0 > 1smd_199 .skhMWpgdikaild...... 2aa0_2.pdb 0 >1bpl-B_41 .vkhIKfsflrdwvnhvrekt 2aa0_3.pdb 0 > 1igs_133 .vkiLTereleslleyar... 2aa0_4.pdb 0 #Motif sequence .VKHMPFGWQKSFMAAVN... .VRGYAPERVNSWMTDS.... .SKHMWPGDIKAILD...... .VKHIKFSFLRDWVNHVREKT .VKILTERELESLLEYAR... #Loop sequence MP YA MW IK LT #Fingerprint M A : K I P L T Y W #Geometry parameters DISTANCE 5.38 ( 0.10) Vector1 ( 0.10 0.10 0.99) Vector2 ( -0.43 -0.63 -0.65) Vector3 ( 0.66 -0.72 -0.21) Struc diversity(A) ( 2.0 1.7) #RMSD matrix of conformation of loops (A) 0.00 0.73 0.86 0.42 1.34 0.73 0.00 0.92 0.89 1.51 0.86 0.92 0.00 1.03 0.72 0.42 0.89 1.03 0.00 1.56 1.34 1.51 0.72 1.56 0.00 #Sequence identities difference matrix of loop (%) 0.0100.0 50.0100.0100.0 100.0 0.0100.0100.0100.0 50.0100.0 0.0100.0100.0 100.0100.0100.0 0.0100.0 100.0100.0100.0100.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 67.0 57.0 71.0 67.0 67.0 0.0 71.0 86.0 71.0 57.0 71.0 0.0 86.0 71.0 71.0 86.0 86.0 0.0 76.0 67.0 71.0 71.0 76.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 84.0 81.0 85.0 89.0 84.0 0.0 81.0 81.0 85.0 81.0 81.0 0.0 83.0 85.0 85.0 81.0 83.0 0.0 84.0 89.0 85.0 85.0 84.0 0.0 #FASTA SCORE matrix of loop sequence - -1 3 1 2 - - -3 -2 -1 - - - -1 - - - - - 1 - - - - - #FASTA SCORE matrix of motif sequence - 1 21 35 4 - - 5 9 6 - - - 7 11 - - - - 14 - - - - - #FASTA SCORE matrix of global PDB chain sequence - -201 -64 -437 -696 - - 34 -128 -299 - - - -191 -386 - - - - -90 - - - - -