#Head information NAME 2bb0 TYPE beta-beta REPRESENTATIVE 1ten_66 MEMBERS 10 CLUSTER 4 #Loop element > 1ten_66 .eyevslisrrGDms........... 2bb0_0.pdb 0 > 1fnf_71 ..ynvsvytvkDDke........... 2bb0_1.pdb 0 > 1cfb_73 anytfrviafnKIga........... 2bb0_2.pdb 1 > 1ctn_83 gryqmqvalcnADgcta......... 2bb0_3.pdb 1 > 3cd4_158 .....tctvlqNQkkv.......... 2bb0_4.pdb 2 >1vca-A_68 ...sylctatcESrklek........ 2bb0_5.pdb 2 > 1fnf_161 .eyvvsvssvyEQhe........... 2bb0_6.pdb 0 > 1cdg_647 .tiefkflkkqGStvtw......... 2bb0_7.pdb 0 > 1fnf_251 .eyvvsivalnGRee........... 2bb0_8.pdb 0 > 1mfa_86 ..aiyfcalwsNNhwif......... 2bb0_9.pdb 3 #Motif sequence .EYEVSLISRRGDMS........... ..YNVSVYTVKDDKE........... ANYTFRVIAFNKIGA........... GRYQMQVALCNADGCTA......... .....TCTVLQNQKKV.......... ...SYLCTATCESRKLEK........ .EYVVSVSSVYEQHE........... .TIEFKFLKKQGSTVTW......... .EYVVSIVALNGREE........... ..AIYFCALWSNNHWIF......... #Loop sequence GD DD KI AD NQ ES EQ GS GR NN #Fingerprint G D : : : : E Q : : N S : : A I D N K R #Geometry parameters DISTANCE 4.95 ( 0.11) Vector1 ( 0.25 -0.88 -0.40) Vector2 ( 0.08 0.86 0.51) Vector3 ( -0.87 -0.21 0.44) Struc diversity(A) ( 5.2 5.8) #RMSD matrix of conformation of loops (A) 0.00 0.92 3.72 3.41 1.70 1.45 0.70 1.33 0.96 3.85 0.92 0.00 4.43 4.15 2.10 1.85 0.76 0.62 0.24 4.32 3.72 4.43 0.00 0.68 3.26 2.99 3.81 4.47 4.44 2.73 3.41 4.15 0.68 0.00 3.13 2.92 3.55 4.21 4.14 2.97 1.70 2.10 3.26 3.13 0.00 0.93 1.47 2.05 2.08 2.42 1.45 1.85 2.99 2.92 0.93 0.00 1.25 1.86 1.91 2.69 0.70 0.76 3.81 3.55 1.47 1.25 0.00 0.83 0.74 3.72 1.33 0.62 4.47 4.21 2.05 1.86 0.83 0.00 0.54 4.20 0.96 0.24 4.44 4.14 2.08 1.91 0.74 0.54 0.00 4.31 3.85 4.32 2.73 2.97 2.42 2.69 3.72 4.20 4.31 0.00 #Sequence identities difference matrix of loop (%) 0.0 50.0100.0 50.0100.0100.0100.0 50.0 50.0100.0 50.0 0.0100.0 50.0100.0100.0100.0100.0100.0100.0 100.0100.0 0.0100.0100.0100.0100.0100.0100.0100.0 50.0 50.0100.0 0.0100.0100.0100.0100.0100.0100.0 100.0100.0100.0100.0 0.0100.0 50.0100.0100.0 50.0 100.0100.0100.0100.0100.0 0.0 50.0 50.0100.0100.0 100.0100.0100.0100.0 50.0 50.0 0.0100.0100.0100.0 50.0100.0100.0100.0100.0 50.0100.0 0.0 50.0100.0 50.0100.0100.0100.0100.0100.0100.0 50.0 0.0100.0 100.0100.0100.0100.0 50.0100.0100.0100.0100.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 38.0 50.0 58.0 58.0 65.0 35.0 54.0 35.0 54.0 38.0 0.0 50.0 54.0 50.0 62.0 31.0 62.0 38.0 58.0 50.0 50.0 0.0 50.0 62.0 65.0 50.0 62.0 46.0 65.0 58.0 54.0 50.0 0.0 65.0 73.0 58.0 62.0 58.0 58.0 58.0 50.0 62.0 65.0 0.0 46.0 54.0 58.0 54.0 50.0 65.0 62.0 65.0 73.0 46.0 0.0 62.0 62.0 62.0 54.0 35.0 31.0 50.0 58.0 54.0 62.0 0.0 62.0 31.0 58.0 54.0 62.0 62.0 62.0 58.0 62.0 62.0 0.0 58.0 52.0 35.0 38.0 46.0 58.0 54.0 62.0 31.0 58.0 0.0 62.0 54.0 58.0 65.0 58.0 50.0 54.0 58.0 52.0 62.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 89.0 87.0 92.0 91.0 85.0 89.0 94.0 89.0 89.0 89.0 0.0 84.0 85.0 86.0 84.0 0.0 83.0 0.0 83.0 87.0 84.0 0.0 89.0 84.0 86.0 84.0 90.0 84.0 84.0 92.0 85.0 89.0 0.0 89.0 89.0 85.0 82.0 85.0 86.0 91.0 86.0 84.0 89.0 0.0 77.0 86.0 90.0 86.0 82.0 85.0 84.0 86.0 89.0 77.0 0.0 84.0 91.0 84.0 78.0 89.0 0.0 84.0 85.0 86.0 84.0 0.0 83.0 0.0 83.0 94.0 83.0 90.0 82.0 90.0 91.0 83.0 0.0 83.0 89.0 89.0 0.0 84.0 85.0 86.0 84.0 0.0 83.0 0.0 83.0 89.0 83.0 84.0 86.0 82.0 78.0 83.0 89.0 83.0 0.0 #FASTA SCORE matrix of loop sequence - 7 -6 8 - -3 -3 8 6 2 - - -5 6 2 2 2 -1 -3 4 - - - -5 -3 -2 -2 -5 -6 -3 - - - - -1 -1 -1 - -2 1 - - - - - - 7 - 1 7 - - - - - - 6 2 -4 1 - - - - - - - -3 -2 - - - - - - - - - 7 1 - - - - - - - - - -1 - - - - - - - - - - #FASTA SCORE matrix of motif sequence - 24 - 7 -7 -17 15 15 27 -19 - - 1 11 11 -3 31 -11 23 -15 - - - 16 -8 -4 1 -2 17 -12 - - - - -9 -11 - -8 5 -14 - - - - - 23 9 -7 8 18 - - - - - - - -14 -9 10 - - - - - - - -22 35 -3 - - - - - - - - -6 -16 - - - - - - - - - -11 - - - - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - -397 -183 -787 -165 -159 -397-1073 -397 -232 - - -152 -224 -264 -229 2417 -404 2417 -135 - - - -498 -51 -40 -152 -778 -152 -64 - - - - -550 -548 -224 -105 -224 -433 - - - - - 26 -264 -824 -264 -39 - - - - - - -229 -824 -229 -23 - - - - - - - -404 2417 -135 - - - - - - - - -404 -658 - - - - - - - - - -135 - - - - - - - - - -