#Head information NAME 2bb2 TYPE beta-beta REPRESENTATIVE 1ldm_285 MEMBERS 7 CLUSTER 2 #Loop element > 1ldm_285 ...flslpcvlnDHgisni 2bb2_0.pdb 0 >9ldt-A_287 ...flsvpcilgQNgisdv 2bb2_1.pdb 0 >1lth-R_268 ..icmsvptllnRQgvnnt 2bb2_2.pdb 0 >1ldn-G_269 rdvyigvpavinRNgirev 2bb2_3.pdb 0 >1hyh-A_251 ...ylsypaiigRDgvlae 2bb2_4.pdb 0 > 2cmd_263 ...ffsqplllgKNgveer 2bb2_5.pdb 0 >1bmd-A_279 ...vysfpvtakDGay... 2bb2_6.pdb 1 #Motif sequence ...FLSLPCVLNDHGISNI ...FLSVPCILGQNGISDV ..ICMSVPTLLNRQGVNNT RDVYIGVPAVINRNGIREV ...YLSYPAIIGRDGVLAE ...FFSQPLLLGKNGVEER ...VYSFPVTAKDGAY... #Loop sequence DH QN RQ RN RD KN DG #Fingerprint R N : : : : D D : G K H Q Q #Geometry parameters DISTANCE 4.84 ( 0.09) Vector1 ( -0.47 -0.87 0.13) Vector2 ( 0.95 -0.18 -0.25) Vector3 ( 0.32 0.65 0.69) Struc diversity(A) ( 2.0 4.0) #RMSD matrix of conformation of loops (A) 0.00 0.83 0.59 0.55 0.57 1.23 2.30 0.83 0.00 0.80 0.33 0.71 0.96 2.92 0.59 0.80 0.00 0.62 0.29 1.39 2.42 0.55 0.33 0.62 0.00 0.54 0.95 2.62 0.57 0.71 0.29 0.54 0.00 1.17 2.42 1.23 0.96 1.39 0.95 1.17 0.00 2.72 2.30 2.92 2.42 2.62 2.42 2.72 0.00 #Sequence identities difference matrix of loop (%) 0.0100.0100.0100.0100.0100.0 50.0 100.0 0.0100.0 50.0100.0 50.0100.0 100.0100.0 0.0 50.0 50.0100.0100.0 100.0 50.0 50.0 0.0 50.0 50.0100.0 100.0100.0 50.0 50.0 0.0100.0100.0 100.0 50.0100.0 50.0100.0 0.0100.0 50.0100.0100.0100.0100.0100.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 37.0 58.0 74.0 63.0 58.0 68.0 37.0 0.0 63.0 68.0 53.0 47.0 74.0 58.0 63.0 0.0 74.0 63.0 58.0 79.0 74.0 68.0 74.0 0.0 68.0 79.0 95.0 63.0 53.0 63.0 68.0 0.0 58.0 65.0 58.0 47.0 58.0 79.0 58.0 0.0 74.0 68.0 74.0 79.0 95.0 65.0 74.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 23.0 62.0 66.0 76.0 77.0 81.0 23.0 0.0 62.0 64.0 73.0 77.0 81.0 62.0 62.0 0.0 60.0 74.0 73.0 77.0 66.0 64.0 60.0 0.0 70.0 72.0 76.0 76.0 73.0 74.0 70.0 0.0 80.0 83.0 77.0 77.0 73.0 72.0 80.0 0.0 76.0 81.0 81.0 77.0 76.0 83.0 76.0 0.0 #FASTA SCORE matrix of loop sequence - 1 -1 -1 -3 - 6 - - 1 8 3 9 - - - - 7 7 3 -4 - - - - 9 10 -2 - - - - - 5 -3 - - - - - - -1 - - - - - - - #FASTA SCORE matrix of motif sequence - 76 47 45 29 33 16 - - 43 53 44 53 5 - - - 46 32 34 5 - - - - 47 37 3 - - - - - 43 15 - - - - - - 8 - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 1687 796 677 351 152 81 - - 827 730 401 192 75 - - - 763 404 250 170 - - - - 520 222 141 - - - - - 110 41 - - - - - - 173 - - - - - - -