#Head information NAME 3ba2 TYPE beta-alpha REPRESENTATIVE 1imb-A_185 MEMBERS 6 CLUSTER 3 #Loop element >1imb-A_185 ...girsVGTaavnmclvat.. 3ba2_0.pdb 0 > 1inp_284 ...rifrAAGagykslcvil.. 3ba2_1.pdb 0 >1pox-A_44 ...hyiqVRHeevgamaaaad. 3ba2_2.pdb 1 > 1lcf_34 ..vsclkRDSpiqciqaia... 3ba2_3.pdb 1 > 1dpe_213 .tlvfsiTPDasvryaklq... 3ba2_4.pdb 2 > 1ovt_29 .sltcvqKATyldcikaia... 3ba2_5.pdb 1 #Motif sequence ...GIRSVGTAAVNMCLVAT.. ...RIFRAAGAGYKSLCVIL.. ...HYIQVRHEEVGAMAAAAD. ..VSCLKRDSPIQCIQAIA... .TLVFSITPDASVRYAKLQ... .SLTCVQKATYLDCIKAIA... #Loop sequence VGT AAG VRH RDS TPD KAT #Fingerprint V A T : : : A D D K G G R P H T R S #Geometry parameters DISTANCE 6.84 ( 0.45) Vector1 ( -0.01 0.11 -0.99) Vector2 ( 0.14 0.62 0.77) Vector3 ( 0.77 0.27 -0.57) Struc diversity(A) ( 2.5 3.6 2.0) #RMSD matrix of conformation of loops (A) 0.00 1.15 1.12 1.19 1.97 1.08 1.15 0.00 1.07 1.50 2.06 1.17 1.12 1.07 0.00 1.08 2.00 0.90 1.19 1.50 1.08 0.00 2.01 0.77 1.97 2.06 2.00 2.01 0.00 2.36 1.08 1.17 0.90 0.77 2.36 0.00 #Sequence identities difference matrix of loop (%) 0.0100.0 67.0100.0100.0 67.0 100.0 0.0100.0100.0100.0 67.0 67.0100.0 0.0100.0100.0100.0 100.0100.0100.0 0.0100.0100.0 100.0100.0100.0100.0 0.0100.0 67.0 67.0100.0100.0100.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 61.0 68.0 77.0 77.0 71.0 61.0 0.0 82.0 82.0 82.0 82.0 68.0 82.0 0.0 74.0 86.0 77.0 77.0 82.0 74.0 0.0 74.0 55.0 77.0 82.0 86.0 74.0 0.0 74.0 71.0 82.0 77.0 55.0 74.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 80.0 86.0 87.0 84.0 87.0 80.0 0.0 84.0 85.0 83.0 85.0 86.0 84.0 0.0 83.0 82.0 84.0 87.0 85.0 83.0 0.0 84.0 48.0 84.0 83.0 82.0 84.0 0.0 82.0 87.0 85.0 84.0 48.0 82.0 0.0 #FASTA SCORE matrix of loop sequence - -2 - -2 -3 2 - - -4 -4 -2 2 - - - -6 -4 -7 - - - - -2 3 - - - - - -3 - - - - - - #FASTA SCORE matrix of motif sequence - 10 -4 -8 -5 -6 - - -11 -15 -14 -17 - - - -8 -17 -7 - - - - -13 56 - - - - - -18 - - - - - - #FASTA SCORE matrix of global PDB chain sequence - -28 -436 -626 -341 -628 - - -270 -411 -156 -411 - - - -204 -98 -249 - - - - -211 2398 - - - - - -219 - - - - - -