#Head information NAME 3ba4 TYPE beta-alpha REPRESENTATIVE 1cms_121 MEMBERS 5 CLUSTER 1 #Loop element > 1cms_121 gilgMAYpsl 3ba4_0.pdb 0 >1smr-A_123 gvlgMGFpaq 3ba4_1.pdb 0 >5apr-E_121 gllgLGFdti 3ba4_2.pdb 0 >1ppm-E_120 gllgLAFssi 3ba4_3.pdb 0 > 1mpp_127 gifgAAYpdn 3ba4_4.pdb 0 #Motif sequence GILGMAYPSL GVLGMGFPAQ GLLGLGFDTI GLLGLAFSSI GIFGAAYPDN #Loop sequence MAY MGF LGF LAF AAY #Fingerprint L A F : : : M : : : G Y A : : #Geometry parameters DISTANCE 7.59 ( 0.20) Vector1 ( 0.13 0.57 0.81) Vector2 ( 0.63 0.06 -0.77) Vector3 ( -0.14 0.99 0.07) Struc diversity(A) ( 0.6 0.6 0.5) #RMSD matrix of conformation of loops (A) 0.00 0.46 0.40 0.42 0.28 0.46 0.00 0.28 0.52 0.38 0.40 0.28 0.00 0.30 0.28 0.42 0.52 0.30 0.00 0.29 0.28 0.38 0.28 0.29 0.00 #Sequence identities difference matrix of loop (%) 0.0 67.0100.0 67.0 33.0 67.0 0.0 33.0 67.0100.0 100.0 33.0 0.0 33.0100.0 67.0 67.0 33.0 0.0 67.0 33.0100.0100.0 67.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 50.0 70.0 50.0 40.0 50.0 0.0 50.0 60.0 70.0 70.0 50.0 0.0 30.0 80.0 50.0 60.0 30.0 0.0 70.0 40.0 70.0 80.0 70.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 63.0 66.0 70.0 72.0 63.0 0.0 72.0 74.0 71.0 66.0 72.0 0.0 60.0 67.0 70.0 74.0 60.0 0.0 71.0 72.0 71.0 67.0 71.0 0.0 #FASTA SCORE matrix of loop sequence - 11 7 12 12 - - 19 11 3 - - - 13 2 - - - - 7 - - - - - #FASTA SCORE matrix of motif sequence - 45 33 41 40 - - 37 30 32 - - - 46 16 - - - - 22 - - - - - #FASTA SCORE matrix of global PDB chain sequence - 816 627 384 426 - - 495 277 419 - - - 686 473 - - - - 355 - - - - -