#Head information NAME 3bb2 TYPE beta-beta REPRESENTATIVE 1thm_209 MEMBERS 6 CLUSTER 1 #Loop element > 1thm_209 iystyPTStyasl 3bb2_0.pdb 0 >2sec-E_204 vystyPTNtyatl 3bb2_1.pdb 0 > 1sup_205 iqstlPGNkygay 3bb2_2.pdb 0 > 1st3_199 vqstyPGStyasl 3bb2_3.pdb 0 >1mee-A_205 iqstlPGGtygay 3bb2_4.pdb 0 > 2prk_208 ilstwIGGstrsi 3bb2_5.pdb 0 #Motif sequence IYSTYPTSTYASL VYSTYPTNTYATL IQSTLPGNKYGAY VQSTYPGSTYASL IQSTLPGGTYGAY ILSTWIGGSTRSI #Loop sequence PTS PTN PGN PGS PGG IGG #Fingerprint P G G : : : : : N : : : : T S I : : #Geometry parameters DISTANCE 6.07 ( 0.16) Vector1 ( -0.96 0.13 0.26) Vector2 ( 0.95 -0.02 0.32) Vector3 ( -0.48 0.01 -0.88) Struc diversity(A) ( 1.2 1.4 0.8) #RMSD matrix of conformation of loops (A) 0.00 0.20 0.96 0.68 0.85 0.58 0.20 0.00 0.97 0.60 0.86 0.55 0.96 0.97 0.00 0.99 0.28 0.73 0.68 0.60 0.99 0.00 0.81 0.37 0.85 0.86 0.28 0.81 0.00 0.53 0.58 0.55 0.73 0.37 0.53 0.00 #Sequence identities difference matrix of loop (%) 0.0 33.0 67.0 33.0 67.0100.0 33.0 0.0 33.0 67.0 67.0100.0 67.0 33.0 0.0 33.0 33.0 67.0 33.0 67.0 33.0 0.0 33.0 67.0 67.0 67.0 33.0 33.0 0.0 33.0 100.0100.0 67.0 67.0 33.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 23.0 62.0 23.0 54.0 69.0 23.0 0.0 62.0 31.0 62.0 85.0 62.0 62.0 0.0 54.0 15.0 69.0 23.0 31.0 54.0 0.0 46.0 69.0 54.0 62.0 15.0 46.0 0.0 62.0 69.0 85.0 69.0 69.0 62.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 55.0 57.0 53.0 57.0 65.0 55.0 0.0 30.0 40.0 30.0 65.0 57.0 30.0 0.0 40.0 14.0 64.0 53.0 40.0 40.0 0.0 40.0 65.0 57.0 30.0 14.0 40.0 0.0 64.0 65.0 65.0 64.0 65.0 64.0 0.0 #FASTA SCORE matrix of loop sequence - 16 9 13 8 -5 - - 15 9 8 -5 - - - 19 18 5 - - - - 18 5 - - - - - 13 - - - - - - #FASTA SCORE matrix of motif sequence - 71 29 62 34 16 - - 33 56 32 12 - - - 46 73 11 - - - - 51 24 - - - - - 21 - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 763 682 763 690 499 - - 1226 1058 1251 452 - - - 1089 1554 476 - - - - 1093 461 - - - - - 496 - - - - - -