#Head information NAME 4ab3 TYPE alpha-beta REPRESENTATIVE 2ebn_145 MEMBERS 9 CLUSTER 2 #Loop element > 2ebn_145 .........nnaaarlayetkqaMPNKlvtvyv. 4ab3_0.pdb 0 > 1edt_143 ...........sfvhlvtalranMPDKiisly.. 4ab3_1.pdb 0 >1xyz-A_152 ...........yldyafryareaDPDAllfynd. 4ab3_2.pdb 0 >1clx-A_158 ..........eyideafrraraaDPTAelyynd. 4ab3_3.pdb 0 >1ece-A_180 ..........laaeragnavlsvNPNLlifve.. 4ab3_4.pdb 1 > 1tml_131 ......qevletmayagkalkagSSQAriyfd.. 4ab3_5.pdb 0 > 1cus_78 ........airemlglfqqantkCPDAtliagg. 4ab3_6.pdb 0 >1chm-A_129 .............lqnrdklaarYPDAelvd... 4ab3_7.pdb 0 > 1esc_150 wlddqfervgaeleelldrigyfAPDAkrvlv.. 4ab3_8.pdb 0 #Motif sequence .........NNAAARLAYETKQAMPNKLVTVYV. ...........SFVHLVTALRANMPDKIISLY.. ...........YLDYAFRYAREADPDALLFYND. ..........EYIDEAFRRARAADPTAELYYND. ..........LAAERAGNAVLSVNPNLLIFVE.. ......QEVLETMAYAGKALKAGSSQARIYFD.. ........AIREMLGLFQQANTKCPDATLIAGG. .............LQNRDKLAARYPDAELVD... WLDDQFERVGAELEELLDRIGYFAPDAKRVLV.. #Loop sequence MPNK MPDK DPDA DPTA NPNL SSQA CPDA YPDA APDA #Fingerprint D P D A : : : : M : : : : : : : A : : : C : N : N : : K S : Q : Y S T L #Geometry parameters DISTANCE 7.53 ( 0.26) Vector1 ( -0.97 -0.23 -0.05) Vector2 ( 1.00 0.00 0.05) Vector3 ( 0.31 -0.89 0.33) Struc diversity(A) ( 1.8 1.3 1.7 1.7) #Key residues 0.0 0.0 0.0 0.0) 0.0 0.0 0.0 0.0) #RMSD matrix of conformation of loops (A) 0.00 0.33 0.46 0.76 1.30 0.81 0.73 0.68 1.03 0.33 0.00 0.55 0.87 1.24 0.98 0.75 0.61 0.95 0.46 0.55 0.00 0.46 0.98 0.64 0.55 0.67 0.75 0.76 0.87 0.46 0.00 1.17 0.65 0.38 0.93 0.81 1.30 1.24 0.98 1.17 0.00 1.17 1.25 1.36 1.10 0.81 0.98 0.64 0.65 1.17 0.00 0.91 1.10 1.18 0.73 0.75 0.55 0.38 1.25 0.91 0.00 0.83 0.63 0.68 0.61 0.67 0.93 1.36 1.10 0.83 0.00 0.80 1.03 0.95 0.75 0.81 1.10 1.18 0.63 0.80 0.00 #Sequence identities difference matrix of loop (%) 0.0 25.0 75.0 75.0 50.0100.0 75.0 75.0 75.0 25.0 0.0 50.0 75.0 75.0100.0 50.0 50.0 50.0 75.0 50.0 0.0 25.0 75.0 75.0 25.0 25.0 25.0 75.0 75.0 25.0 0.0 75.0 75.0 50.0 50.0 50.0 50.0 75.0 75.0 75.0 0.0100.0 75.0 75.0 75.0 100.0100.0 75.0 75.0100.0 0.0 75.0 75.0 75.0 75.0 50.0 25.0 50.0 75.0 75.0 0.0 25.0 25.0 75.0 50.0 25.0 50.0 75.0 75.0 25.0 0.0 25.0 75.0 50.0 25.0 50.0 75.0 75.0 25.0 25.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 56.0 62.0 65.0 50.0 74.0 68.0 68.0 91.0 56.0 0.0 56.0 59.0 56.0 65.0 65.0 50.0 82.0 62.0 56.0 0.0 24.0 56.0 71.0 56.0 53.0 85.0 65.0 59.0 24.0 0.0 62.0 65.0 59.0 53.0 85.0 50.0 56.0 56.0 62.0 0.0 65.0 71.0 62.0 88.0 74.0 65.0 71.0 65.0 65.0 0.0 74.0 68.0 88.0 68.0 65.0 56.0 59.0 71.0 74.0 0.0 59.0 82.0 68.0 50.0 53.0 53.0 62.0 68.0 59.0 0.0 79.0 91.0 82.0 85.0 85.0 88.0 88.0 82.0 79.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 68.0 83.0 83.0 80.0 83.0 82.0 84.0 81.0 68.0 0.0 86.0 81.0 83.0 83.0 83.0 82.0 80.0 83.0 86.0 0.0 69.0 81.0 84.0 86.0 82.0 81.0 83.0 81.0 69.0 0.0 81.0 82.0 85.0 82.0 80.0 80.0 83.0 81.0 81.0 0.0 84.0 85.0 85.0 81.0 83.0 83.0 84.0 82.0 84.0 0.0 80.0 81.0 80.0 82.0 83.0 86.0 85.0 85.0 80.0 0.0 83.0 84.0 84.0 82.0 82.0 82.0 85.0 81.0 83.0 0.0 83.0 81.0 80.0 81.0 80.0 81.0 80.0 84.0 83.0 0.0 #FASTA SCORE matrix of loop sequence - 25 7 5 12 -4 9 11 10 - - 13 4 7 -4 15 17 16 - - - 22 12 4 19 20 21 - - - - 10 3 10 11 12 - - - - - -2 8 8 9 - - - - - - 3 2 5 - - - - - - - 20 22 - - - - - - - - 21 - - - - - - - - - #FASTA SCORE matrix of motif sequence - 42 -1 -10 26 -11 -9 -9 -8 - - 5 -6 - 8 5 9 4 - - - 102 17 22 22 -2 - - - - - 4 29 14 12 7 - - - - - 12 -17 -6 -9 - - - - - - -7 -5 -14 - - - - - - - 24 13 - - - - - - - - 20 - - - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 448 -63 -56 -51 -61 -117 -149 -90 - - -107 -81 -78 -45 -99 -154 -14 - - - 551 -18 -73 -202 -76 -43 - - - - -79 -53 -193 -85 -34 - - - - - -60 -229 -147 -110 - - - - - - -118 -131 -52 - - - - - - - -320 -140 - - - - - - - - -156 - - - - - - - - -