#Head information NAME 4ba5 TYPE beta-alpha REPRESENTATIVE 1dpg-A_6 MEMBERS 5 CLUSTER 2 #Loop element >1dpg-A_6 .tlvtffGGTGdlakr 4ba5_0.pdb 0 > 2cmd_2 ..kvavlGAAGgigq. 4ba5_1.pdb 0 >1cyd-A_7 ..ralvtGAGKgigr. 4ba5_2.pdb 1 > 1dhr_4 ..rvlvyGGRGalgs. 4ba5_3.pdb 0 >1scu-A_9 ..kvicqGFTGsqgt. 4ba5_4.pdb 0 #Motif sequence .TLVTFFGGTGDLAKR ..KVAVLGAAGGIGQ. ..RALVTGAGKGIGR. ..RVLVYGGRGALGS. ..KVICQGFTGSQGT. #Loop sequence GGTG GAAG GAGK GGRG GFTG #Fingerprint G A T G : : : : : G A : : : G : : F R K #Geometry parameters DISTANCE 8.06 ( 0.29) Vector1 ( -0.68 -0.58 0.45) Vector2 ( 1.00 -0.07 -0.06) Vector3 ( 0.26 -0.95 -0.20) Struc diversity(A) ( 1.4 1.3 1.3 2.9) #Key residues 0.0 0.0 0.0 0.0) 0.0 0.0 0.0 0.0) #RMSD matrix of conformation of loops (A) 0.00 0.93 1.87 0.81 0.70 0.93 0.00 1.36 0.61 0.76 1.87 1.36 0.00 1.32 1.47 0.81 0.61 1.32 0.00 0.62 0.70 0.76 1.47 0.62 0.00 #Sequence identities difference matrix of loop (%) 0.0 50.0 75.0 25.0 25.0 50.0 0.0 50.0 50.0 50.0 75.0 50.0 0.0 75.0 75.0 25.0 50.0 75.0 0.0 50.0 25.0 50.0 75.0 50.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 75.0 88.0 62.0 69.0 75.0 0.0 44.0 50.0 50.0 88.0 44.0 0.0 41.0 69.0 62.0 50.0 41.0 0.0 56.0 69.0 50.0 69.0 56.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 83.0 84.0 85.0 84.0 83.0 0.0 79.0 84.0 80.0 84.0 79.0 0.0 79.0 85.0 85.0 84.0 79.0 0.0 85.0 84.0 80.0 85.0 85.0 0.0 #FASTA SCORE matrix of loop sequence - 16 4 23 17 - - 11 14 13 - - - 3 1 - - - - 11 - - - - - #FASTA SCORE matrix of motif sequence - 21 1 30 9 - - 38 34 24 - - - 27 8 - - - - 28 - - - - - #FASTA SCORE matrix of global PDB chain sequence - -218 -352 -342 -297 - - -67 -131 17 - - - 31 -71 - - - - -94 - - - - -