#Head information NAME 4bb1 TYPE beta-beta REPRESENTATIVE 1smr-A_314 MEMBERS 8 CLUSTER 3 #Loop element >1smr-A_314 fytefdRHNNrigfala 4bb1_0.pdb 0 >1hrn-B_316 fytefdRRNNrigfala 4bb1_1.pdb 0 >5apr-E_307 nyvvfnQGVPevqiapv 4bb1_2.pdb 1 >1ppm-E_306 qyvvfdSDGPqlgfapq 4bb1_3.pdb 2 >1htr-B_312 yysvydLGNNrvgfata 4bb1_4.pdb 0 > 1mpp_334 fvnvydFGKNrigfapl 4bb1_5.pdb 0 > 2asi_333 fvnvydFGNNrigfapl 4bb1_6.pdb 0 >1lya-D_224 yytvfdRDNNrvgfaea 4bb1_7.pdb 0 #Motif sequence FYTEFDRHNNRIGFALA FYTEFDRRNNRIGFALA NYVVFNQGVPEVQIAPV QYVVFDSDGPQLGFAPQ YYSVYDLGNNRVGFATA FVNVYDFGKNRIGFAPL FVNVYDFGNNRIGFAPL YYTVFDRDNNRVGFAEA #Loop sequence RHNN RRNN QGVP SDGP LGNN FGKN FGNN RDNN #Fingerprint R G N N : : : : : : : : F : : : : D : : L : G : Q H K P S R V : #Geometry parameters DISTANCE 5.84 ( 0.13) Vector1 ( -0.74 0.67 0.05) Vector2 ( 0.39 -0.91 0.17) Vector3 ( 0.78 0.63 0.01) Struc diversity(A) ( 2.2 2.9 2.9 1.6) #Key residues 0.2 0.1 0.2 0.2) 0.0 0.0 0.0 0.0) #RMSD matrix of conformation of loops (A) 0.00 0.36 2.23 1.47 0.29 0.70 0.63 0.16 0.36 0.00 2.01 1.23 0.56 0.89 0.85 0.35 2.23 2.01 0.00 1.79 2.27 2.24 2.27 2.28 1.47 1.23 1.79 0.00 1.65 1.87 1.85 1.45 0.29 0.56 2.27 1.65 0.00 0.45 0.38 0.32 0.70 0.89 2.24 1.87 0.45 0.00 0.12 0.72 0.63 0.85 2.27 1.85 0.38 0.12 0.00 0.66 0.16 0.35 2.28 1.45 0.32 0.72 0.66 0.00 #Sequence identities difference matrix of loop (%) 0.0 25.0100.0100.0 50.0 75.0 50.0 25.0 25.0 0.0100.0100.0 50.0 75.0 50.0 25.0 100.0100.0 0.0 75.0 75.0 75.0 75.0100.0 100.0100.0 75.0 0.0100.0100.0100.0 75.0 50.0 50.0 75.0100.0 0.0 50.0 25.0 50.0 75.0 75.0 75.0100.0 50.0 0.0 25.0 75.0 50.0 50.0 75.0100.0 25.0 25.0 0.0 50.0 25.0 25.0100.0 75.0 50.0 75.0 50.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 6.0 82.0 65.0 47.0 53.0 47.0 29.0 6.0 0.0 82.0 65.0 47.0 53.0 47.0 29.0 82.0 82.0 0.0 59.0 71.0 76.0 76.0 71.0 65.0 65.0 59.0 0.0 65.0 65.0 65.0 53.0 47.0 47.0 71.0 65.0 0.0 47.0 41.0 29.0 53.0 53.0 76.0 65.0 47.0 0.0 6.0 59.0 47.0 47.0 76.0 65.0 41.0 6.0 0.0 53.0 29.0 29.0 71.0 53.0 29.0 59.0 53.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 30.0 72.0 74.0 63.0 71.0 72.0 69.0 30.0 0.0 73.0 78.0 65.0 71.0 72.0 70.0 72.0 73.0 0.0 60.0 69.0 67.0 71.0 78.0 74.0 78.0 60.0 0.0 68.0 71.0 72.0 78.0 63.0 65.0 69.0 68.0 0.0 70.0 69.0 72.0 71.0 71.0 67.0 71.0 70.0 0.0 19.0 80.0 72.0 72.0 71.0 72.0 69.0 19.0 0.0 81.0 69.0 70.0 78.0 78.0 72.0 80.0 81.0 0.0 #FASTA SCORE matrix of loop sequence - 21 -6 -4 9 2 9 20 - - -7 -5 8 1 8 19 - - - 5 1 -1 -1 -5 - - - - -6 -8 -6 5 - - - - - 16 23 10 - - - - - - 23 3 - - - - - - - 10 - - - - - - - - #FASTA SCORE matrix of motif sequence - 107 8 32 68 45 52 84 - - 7 31 67 44 51 83 - - - 46 23 20 20 23 - - - - 37 33 35 54 - - - - - 70 77 82 - - - - - - 112 52 - - - - - - - 59 - - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 1632 495 277 844 419 374 561 - - 430 228 759 415 378 540 - - - 686 587 473 415 160 - - - - 455 355 348 75 - - - - - 508 526 404 - - - - - - 2015 61 - - - - - - - 27 - - - - - - - -