#Head information NAME 4bb4 TYPE beta-beta REPRESENTATIVE 1mlb-A_129 MEMBERS 11 CLUSTER 2 #Loop element >1mlb-A_129 gasvvcflnnfyPKDInvkwki 4bb4_0.pdb 0 >1vge-L_129 tasvvcllnnfyPREAkvqwkv 4bb4_1.pdb 0 >2fb4-L_134 .atlvclisdfyPGAVtvawka 4bb4_2.pdb 0 >1opg-H_147 mvtlgclvkgyfPEPVtvtw.. 4bb4_3.pdb 1 >1hsb-B_21 .nflncyvsgfhPSDIevdllk 4bb4_4.pdb 0 >1hsb-A_198 eatlrcwalsfyPAEItltwqr 4bb4_5.pdb 0 >1vad-B_21 .nilncyvtqfhPPHIeiqmlk 4bb4_6.pdb 0 >1fru-F_21 .nflncyvsqfhPPQIeiellk 4bb4_7.pdb 0 >1cly-H_142 .aalgclvkdyfPQPVtvsw.. 4bb4_8.pdb 1 >2vaa-A_198 kvtlrcwalgfyPADItltwql 4bb4_9.pdb 0 >1fru-C_195 ssvltcaafsfyPPELkfrflr 4bb4_10.pdb 0 #Motif sequence GASVVCFLNNFYPKDINVKWKI TASVVCLLNNFYPREAKVQWKV .ATLVCLISDFYPGAVTVAWKA MVTLGCLVKGYFPEPVTVTW.. .NFLNCYVSGFHPSDIEVDLLK EATLRCWALSFYPAEITLTWQR .NILNCYVTQFHPPHIEIQMLK .NFLNCYVSQFHPPQIEIELLK .AALGCLVKDYFPQPVTVSW.. KVTLRCWALGFYPADITLTWQL SSVLTCAAFSFYPPELKFRFLR #Loop sequence PKDI PREA PGAV PEPV PSDI PAEI PPHI PPQI PQPV PADI PPEL #Fingerprint P P D I : : : : : : : : : A E : : : : : : E : : : G P V : K : : : Q A : : R H A : S Q L #Geometry parameters DISTANCE 9.88 ( 0.17) Vector1 ( -0.96 0.28 0.05) Vector2 ( 0.71 -0.70 -0.06) Vector3 ( 0.86 -0.30 0.40) Struc diversity(A) ( 1.8 2.1 1.6 1.7) #Key residues 0.0 0.0 0.0 0.0) 0.0 0.0 0.0 0.0) #RMSD matrix of conformation of loops (A) 0.00 0.71 0.74 0.93 0.48 0.79 0.47 0.77 1.02 0.55 0.52 0.71 0.00 0.58 1.10 0.36 1.38 0.98 1.28 1.11 1.10 0.39 0.74 0.58 0.00 1.16 0.55 1.13 1.00 1.29 1.10 0.92 0.35 0.93 1.10 1.16 0.00 1.02 1.16 0.98 1.20 0.32 0.99 1.01 0.48 0.36 0.55 1.02 0.00 1.11 0.71 1.05 1.06 0.84 0.37 0.79 1.38 1.13 1.16 1.11 0.00 0.73 0.85 1.21 0.37 1.09 0.47 0.98 1.00 0.98 0.71 0.73 0.00 0.46 1.05 0.48 0.83 0.77 1.28 1.29 1.20 1.05 0.85 0.46 0.00 1.30 0.70 1.13 1.02 1.11 1.10 0.32 1.06 1.21 1.05 1.30 0.00 1.02 0.98 0.55 1.10 0.92 0.99 0.84 0.37 0.48 0.70 1.02 0.00 0.83 0.52 0.39 0.35 1.01 0.37 1.09 0.83 1.13 0.98 0.83 0.00 #Sequence identities difference matrix of loop (%) 0.0 75.0 75.0 75.0 25.0 50.0 50.0 50.0 75.0 25.0 75.0 75.0 0.0 75.0 75.0 75.0 50.0 75.0 75.0 75.0 75.0 50.0 75.0 75.0 0.0 50.0 75.0 75.0 75.0 75.0 50.0 75.0 75.0 75.0 75.0 50.0 0.0 75.0 75.0 75.0 75.0 25.0 75.0 75.0 25.0 75.0 75.0 75.0 0.0 50.0 50.0 50.0 75.0 25.0 75.0 50.0 50.0 75.0 75.0 50.0 0.0 50.0 50.0 75.0 25.0 50.0 50.0 75.0 75.0 75.0 50.0 50.0 0.0 25.0 75.0 50.0 50.0 50.0 75.0 75.0 75.0 50.0 50.0 25.0 0.0 75.0 50.0 50.0 75.0 75.0 50.0 25.0 75.0 75.0 75.0 75.0 0.0 75.0 75.0 25.0 75.0 75.0 75.0 25.0 25.0 50.0 50.0 75.0 0.0 75.0 75.0 50.0 75.0 75.0 75.0 50.0 50.0 50.0 75.0 75.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 36.0 59.0 82.0 73.0 68.0 82.0 82.0 77.0 68.0 82.0 36.0 0.0 55.0 77.0 82.0 68.0 82.0 86.0 73.0 77.0 73.0 59.0 55.0 0.0 59.0 68.0 59.0 77.0 73.0 50.0 64.0 77.0 82.0 77.0 59.0 0.0 73.0 68.0 82.0 82.0 27.0 59.0 86.0 73.0 82.0 68.0 73.0 0.0 77.0 36.0 23.0 73.0 68.0 77.0 68.0 68.0 59.0 68.0 77.0 0.0 77.0 77.0 73.0 23.0 59.0 82.0 82.0 77.0 82.0 36.0 77.0 0.0 23.0 77.0 77.0 73.0 82.0 86.0 73.0 82.0 23.0 77.0 23.0 0.0 77.0 77.0 73.0 77.0 73.0 50.0 27.0 73.0 73.0 77.0 77.0 0.0 77.0 86.0 68.0 77.0 64.0 59.0 68.0 23.0 77.0 77.0 77.0 0.0 73.0 82.0 73.0 77.0 86.0 77.0 59.0 73.0 73.0 86.0 73.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 38.0 61.0 75.0 87.0 82.0 90.0 89.0 75.0 82.0 81.0 38.0 0.0 58.0 73.0 86.0 82.0 85.0 81.0 72.0 82.0 78.0 61.0 58.0 0.0 71.0 88.0 82.0 89.0 88.0 70.0 80.0 82.0 75.0 73.0 71.0 0.0 87.0 80.0 88.0 88.0 34.0 82.0 84.0 87.0 86.0 88.0 87.0 0.0 91.0 30.0 25.0 88.0 88.0 89.0 82.0 82.0 82.0 80.0 91.0 0.0 87.0 86.0 80.0 30.0 74.0 90.0 85.0 89.0 88.0 30.0 87.0 0.0 14.0 86.0 89.0 89.0 89.0 81.0 88.0 88.0 25.0 86.0 14.0 0.0 87.0 88.0 89.0 75.0 72.0 70.0 34.0 88.0 80.0 86.0 87.0 0.0 81.0 82.0 82.0 82.0 80.0 82.0 88.0 30.0 89.0 88.0 81.0 0.0 71.0 81.0 78.0 82.0 84.0 89.0 74.0 89.0 89.0 82.0 71.0 0.0 #FASTA SCORE matrix of loop sequence - 14 10 14 23 16 13 14 15 22 13 - - 6 9 10 13 6 8 10 9 11 - - - 11 12 13 10 11 12 12 8 - - - - 12 12 11 12 27 12 9 - - - - - 18 13 14 13 24 13 - - - - - - 14 16 12 22 17 - - - - - - - 26 11 13 22 - - - - - - - - 12 14 24 - - - - - - - - - 12 9 - - - - - - - - - - 13 - - - - - - - - - - - #FASTA SCORE matrix of motif sequence - 113 82 52 42 56 34 34 63 63 30 - - 82 52 26 52 28 25 61 46 36 - - - 71 37 69 35 37 82 62 29 - - - - 41 59 30 30 111 72 21 - - - - - 39 100 116 35 45 43 - - - - - - 40 38 58 128 63 - - - - - - - 125 35 29 61 - - - - - - - - 33 26 57 - - - - - - - - - 52 26 - - - - - - - - - - 42 - - - - - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 921 501 230 -127 -17 -150 -144 249 -21 -9 - - 525 227 -122 -42 -121 -107 250 -49 25 - - - 268 -147 -21 -138 -148 267 - -7 - - - - -182 -6 -175 -178 966 -31 -79 - - - - - -272 510 533 -177 -234 -245 - - - - - - -248 -245 -9 1362 357 - - - - - - - 624 -183 -245 -220 - - - - - - - - -186 -246 -234 - - - - - - - - - -35 -43 - - - - - - - - - - 370 - - - - - - - - - - -