#Head information NAME 4bb5 TYPE beta-beta REPRESENTATIVE 1lzr_51 MEMBERS 8 CLUSTER 2 #Loop element > 1lzr_51 stdyGIFQin 4bb5_0.pdb 0 > 1yao_51 stdyGVFQin 4bb5_1.pdb 0 > 1lzg_51 .tdyGILQin 4bb5_2.pdb 0 > 1heo_51 .tdyGVLQin 4bb5_3.pdb 0 > 1lsm_51 .tdyGLLQin 4bb5_4.pdb 0 > 2eql_52 .sdyGLFQln 4bb5_5.pdb 0 > 153l_90 ..gfGLMQvd 4bb5_6.pdb 0 >1chk-A_44 .ytgGIIGfc 4bb5_7.pdb 1 #Motif sequence STDYGIFQIN STDYGVFQIN .TDYGILQIN .TDYGVLQIN .TDYGLLQIN .SDYGLFQLN ..GFGLMQVD .YTGGIIGFC #Loop sequence GIFQ GVFQ GILQ GVLQ GLLQ GLFQ GLMQ GIIG #Fingerprint G I F Q : : : : : : : : : L L : : : : : : : : : : V I : : : M G #Geometry parameters DISTANCE 5.39 ( 0.09) Vector1 ( 0.05 0.95 -0.30) Vector2 ( -0.20 -0.86 0.47) Vector3 ( 0.87 -0.43 0.23) Struc diversity(A) ( 1.5 2.5 1.0 0.8) #Key residues 0.0 0.0 0.0 0.0) 0.0 0.0 0.0 0.0) #RMSD matrix of conformation of loops (A) 0.00 0.10 0.12 0.16 0.23 0.15 0.84 1.02 0.10 0.00 0.16 0.20 0.21 0.22 0.84 0.99 0.12 0.16 0.00 0.14 0.23 0.15 0.76 1.09 0.16 0.20 0.14 0.00 0.21 0.21 0.74 1.06 0.23 0.21 0.23 0.21 0.00 0.33 0.76 1.00 0.15 0.22 0.15 0.21 0.33 0.00 0.87 1.09 0.84 0.84 0.76 0.74 0.76 0.87 0.00 1.57 1.02 0.99 1.09 1.06 1.00 1.09 1.57 0.00 #Sequence identities difference matrix of loop (%) 0.0 25.0 25.0 50.0 50.0 25.0 50.0 50.0 25.0 0.0 50.0 25.0 50.0 25.0 50.0 75.0 25.0 50.0 0.0 25.0 25.0 50.0 50.0 50.0 50.0 25.0 25.0 0.0 25.0 50.0 50.0 75.0 50.0 50.0 25.0 25.0 0.0 25.0 25.0 75.0 25.0 25.0 50.0 50.0 25.0 0.0 25.0 75.0 50.0 50.0 50.0 50.0 25.0 25.0 0.0 75.0 50.0 75.0 50.0 75.0 75.0 75.0 75.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 10.0 20.0 30.0 30.0 40.0 80.0 80.0 10.0 0.0 30.0 20.0 30.0 40.0 80.0 90.0 20.0 30.0 0.0 10.0 10.0 40.0 70.0 70.0 30.0 20.0 10.0 0.0 10.0 40.0 70.0 80.0 30.0 30.0 10.0 10.0 0.0 30.0 60.0 80.0 40.0 40.0 40.0 40.0 30.0 0.0 60.0 80.0 80.0 80.0 70.0 70.0 60.0 60.0 0.0 80.0 80.0 90.0 70.0 80.0 80.0 80.0 80.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 1.0 40.0 41.0 42.0 49.0 81.0 85.0 1.0 0.0 41.0 40.0 42.0 49.0 81.0 85.0 40.0 41.0 0.0 2.0 3.0 52.0 84.0 87.0 41.0 40.0 2.0 0.0 2.0 51.0 84.0 87.0 42.0 42.0 3.0 2.0 0.0 51.0 83.0 87.0 49.0 49.0 52.0 51.0 51.0 0.0 86.0 85.0 81.0 81.0 84.0 84.0 83.0 86.0 0.0 84.0 85.0 85.0 87.0 87.0 87.0 85.0 84.0 0.0 #FASTA SCORE matrix of loop sequence - 27 21 20 18 25 17 11 - - 20 21 17 24 16 10 - - - 24 22 18 20 13 - - - - 21 17 19 12 - - - - - 21 23 10 - - - - - - 20 8 - - - - - - - 10 - - - - - - - - #FASTA SCORE matrix of motif sequence - 65 54 53 51 52 26 3 - - 53 54 50 51 25 2 - - - 57 55 45 29 5 - - - - 54 44 28 4 - - - - - 48 32 2 - - - - - - 26 1 - - - - - - - -1 - - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 931 586 583 572 516 -29 -192 - - 585 584 571 515 -30 -191 - - - 912 899 479 -72 -169 - - - - 912 492 -74 -169 - - - - - 487 -65 -165 - - - - - - -86 -177 - - - - - - - -98 - - - - - - - -