#Head information NAME 6ab0 TYPE alpha-beta REPRESENTATIVE 1rro_40 MEMBERS 5 CLUSTER 1 #Loop element > 1rro_40 ..asqvkdifrfiDNDQSGyl 6ab0_0.pdb 0 > 1cdp_40 ..addvkkafaiiDQDKSGfi 6ab0_1.pdb 0 >1rtp-1_40 ..addvkkvfhilDKDKSGfi 6ab0_2.pdb 0 > 5pal_40 ..daqvkevfeilDKDQSGfi 6ab0_3.pdb 0 >2scp-B_96 .....lplffravDTNEDNni 6ab0_4.pdb 0 #Motif sequence ..ASQVKDIFRFIDNDQSGYL ..ADDVKKAFAIIDQDKSGFI ..ADDVKKVFHILDKDKSGFI ..DAQVKEVFEILDKDQSGFI .....LPLFFRAVDTNEDNNI #Loop sequence DNDQSG DQDKSG DKDKSG DKDQSG DTNEDN #Fingerprint D K D K S G : : : : : : : N : Q : : : Q : : : : : T N E D N #Geometry parameters DISTANCE 7.46 ( 0.06) Vector1 ( 0.23 0.97 -0.08) Vector2 ( 0.68 0.03 -0.73) Vector3 ( -0.99 -0.02 0.16) Struc diversity(A) ( 0.3 0.5 1.0 0.9 0.4 0.5) #RMSD matrix of conformation of loops (A) 0.00 0.53 0.18 0.19 0.20 0.53 0.00 0.49 0.49 0.63 0.18 0.49 0.00 0.18 0.32 0.19 0.49 0.18 0.00 0.30 0.20 0.63 0.32 0.30 0.00 #Sequence identities difference matrix of loop (%) 0.0 33.0 33.0 17.0 83.0 33.0 0.0 17.0 33.0 83.0 33.0 17.0 0.0 17.0 83.0 17.0 33.0 17.0 0.0 83.0 83.0 83.0 83.0 83.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 48.0 52.0 48.0 76.0 48.0 0.0 19.0 43.0 76.0 52.0 19.0 0.0 29.0 76.0 48.0 43.0 29.0 0.0 76.0 76.0 76.0 76.0 76.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 51.0 49.0 56.0 86.0 51.0 0.0 42.0 50.0 83.0 49.0 42.0 0.0 41.0 80.0 56.0 50.0 41.0 0.0 82.0 86.0 83.0 80.0 82.0 0.0 #FASTA SCORE matrix of loop sequence - 31 31 36 12 - - 37 33 10 - - - 37 10 - - - - 11 - - - - - #FASTA SCORE matrix of motif sequence - 62 66 75 24 - - 101 68 14 - - - 81 15 - - - - 16 - - - - - #FASTA SCORE matrix of global PDB chain sequence - 351 355 325 -89 - - 382 309 -70 - - - 421 -67 - - - - -76 - - - - -