#Head information NAME 6bb1 TYPE beta-beta REPRESENTATIVE 1mlb-A_33 MEMBERS 12 CLUSTER 5 #Loop element >1mlb-A_33 ..lhwyqqKSHESPrllik. 6bb1_0.pdb 0 >1hil-A_39 ..ltwyqqKPGQPPkvliy. 6bb1_1.pdb 0 >1fdl-L_33 ..lawyqqKQGKSPqllvy. 6bb1_2.pdb 0 >1vge-L_33 ..lawyqqKPGKAPrlliy. 6bb1_3.pdb 0 >1eap-A_33 ..igwyqhKPGKGPrllih. 6bb1_4.pdb 1 >1wtl-B_33 ..vnwfqqRPGQAPkvliy. 6bb1_5.pdb 0 >2fb4-L_35 ...nwyqqLPGMAPklliy. 6bb1_6.pdb 2 >1bre-B_34 ...iwyqqKLGKAPnlliy. 6bb1_7.pdb 0 >1jhl-L_33 ..lawyqeKPGKTNnlliy. 6bb1_8.pdb 3 >4bjl-B_34 ..vtwyqhLSGTAPklliy. 6bb1_9.pdb 4 >1rei-A_33 ..lnwyqqTPGKAPklliy. 6bb1_10.pdb 0 >7fab-L_36 ...kwyqqLPGTAPkl.... 6bb1_11.pdb 0 #Motif sequence ..LHWYQQKSHESPRLLIK. ..LTWYQQKPGQPPKVLIY. ..LAWYQQKQGKSPQLLVY. ..LAWYQQKPGKAPRLLIY. ..IGWYQHKPGKGPRLLIH. ..VNWFQQRPGQAPKVLIY. ...NWYQQLPGMAPKLLIY. ...IWYQQKLGKAPNLLIY. ..LAWYQEKPGKTNNLLIY. ..VTWYQHLSGTAPKLLIY. ..LNWYQQTPGKAPKLLIY. ...KWYQQLPGTAPKL.... #Loop sequence KSHESP KPGQPP KQGKSP KPGKAP KPGKGP RPGQAP LPGMAP KLGKAP KPGKTN LSGTAP TPGKAP LPGTAP #Fingerprint K P G K A P : : : : : : : : : : : : : : : : : : : : : : : : : : : : : : : : : Q : : L : : : S : : S : T : : : : : : G : R L : E P : T Q H M T N #Geometry parameters DISTANCE 6.62 ( 0.18) Vector1 ( 0.22 -0.80 -0.56) Vector2 ( -0.45 0.78 0.43) Vector3 ( 0.12 0.99 -0.06) Struc diversity(A) ( 2.0 4.1 6.8 3.9 2.8 1.9) #RMSD matrix of conformation of loops (A) 0.00 0.99 0.61 0.49 1.57 0.47 1.99 0.32 2.19 1.26 0.60 0.73 0.99 0.00 0.80 1.04 0.94 1.09 2.86 0.87 1.58 1.27 0.83 0.36 0.61 0.80 0.00 0.62 1.57 0.81 2.36 0.46 2.14 1.30 0.67 0.46 0.49 1.04 0.62 0.00 1.72 0.65 1.92 0.48 2.30 1.05 0.65 0.79 1.57 0.94 1.57 1.72 0.00 1.68 3.29 1.53 0.89 1.61 1.31 1.19 0.47 1.09 0.81 0.65 1.68 0.00 2.08 0.51 2.33 1.42 0.94 0.88 1.99 2.86 2.36 1.92 3.29 2.08 0.00 2.13 3.74 2.22 2.19 2.61 0.32 0.87 0.46 0.48 1.53 0.51 2.13 0.00 2.12 1.19 0.57 0.59 2.19 1.58 2.14 2.30 0.89 2.33 3.74 2.12 0.00 1.87 1.79 1.79 1.26 1.27 1.30 1.05 1.61 1.42 2.22 1.19 1.87 0.00 0.89 1.22 0.60 0.83 0.67 0.65 1.31 0.94 2.19 0.57 1.79 0.89 0.00 0.64 0.73 0.36 0.46 0.79 1.19 0.88 2.61 0.59 1.79 1.22 0.64 0.00 #Sequence identities difference matrix of loop (%) 0.0 67.0 50.0 67.0 67.0 83.0 83.0 67.0 83.0 67.0 83.0 83.0 67.0 0.0 50.0 33.0 33.0 33.0 50.0 50.0 50.0 67.0 50.0 50.0 50.0 50.0 0.0 33.0 33.0 67.0 67.0 33.0 50.0 67.0 50.0 67.0 67.0 33.0 33.0 0.0 17.0 33.0 33.0 17.0 33.0 50.0 17.0 33.0 67.0 33.0 33.0 17.0 0.0 50.0 50.0 33.0 33.0 67.0 33.0 50.0 83.0 33.0 67.0 33.0 50.0 0.0 33.0 50.0 67.0 50.0 33.0 33.0 83.0 50.0 67.0 33.0 50.0 33.0 0.0 50.0 67.0 33.0 33.0 17.0 67.0 50.0 33.0 17.0 33.0 50.0 50.0 0.0 50.0 50.0 33.0 50.0 83.0 50.0 50.0 33.0 33.0 67.0 67.0 50.0 0.0 83.0 50.0 67.0 67.0 67.0 67.0 50.0 67.0 50.0 33.0 50.0 83.0 0.0 50.0 17.0 83.0 50.0 50.0 17.0 33.0 33.0 33.0 33.0 50.0 50.0 0.0 33.0 83.0 50.0 67.0 33.0 50.0 33.0 17.0 50.0 67.0 17.0 33.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 40.0 35.0 30.0 40.0 55.0 45.0 40.0 45.0 45.0 40.0 55.0 40.0 0.0 35.0 25.0 40.0 25.0 30.0 35.0 35.0 35.0 25.0 45.0 35.0 35.0 0.0 20.0 40.0 50.0 40.0 30.0 30.0 45.0 30.0 50.0 30.0 25.0 20.0 0.0 25.0 35.0 25.0 20.0 20.0 35.0 15.0 40.0 40.0 40.0 40.0 25.0 0.0 50.0 40.0 35.0 35.0 40.0 35.0 50.0 55.0 25.0 50.0 35.0 50.0 0.0 25.0 40.0 50.0 35.0 25.0 45.0 45.0 30.0 40.0 25.0 40.0 25.0 0.0 25.0 40.0 25.0 15.0 25.0 40.0 35.0 30.0 20.0 35.0 40.0 25.0 0.0 30.0 35.0 25.0 40.0 45.0 35.0 30.0 20.0 35.0 50.0 40.0 30.0 0.0 45.0 30.0 55.0 45.0 35.0 45.0 35.0 40.0 35.0 25.0 35.0 45.0 0.0 30.0 35.0 40.0 25.0 30.0 15.0 35.0 25.0 15.0 25.0 30.0 30.0 0.0 35.0 55.0 45.0 50.0 40.0 50.0 45.0 25.0 40.0 55.0 35.0 35.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 25.0 20.0 38.0 23.0 72.0 61.0 72.0 67.0 61.0 73.0 60.0 25.0 0.0 25.0 40.0 27.0 68.0 58.0 70.0 71.0 58.0 69.0 57.0 20.0 25.0 0.0 36.0 21.0 68.0 59.0 65.0 68.0 58.0 67.0 59.0 38.0 40.0 36.0 0.0 40.0 62.0 58.0 61.0 64.0 60.0 63.0 58.0 23.0 27.0 21.0 40.0 0.0 68.0 60.0 66.0 69.0 62.0 67.0 60.0 72.0 68.0 68.0 62.0 68.0 0.0 76.0 18.0 39.0 76.0 19.0 77.0 61.0 58.0 59.0 58.0 60.0 76.0 0.0 76.0 79.0 10.0 75.0 20.0 72.0 70.0 65.0 61.0 66.0 18.0 76.0 0.0 35.0 76.0 16.0 78.0 67.0 71.0 68.0 64.0 69.0 39.0 79.0 35.0 0.0 78.0 37.0 79.0 61.0 58.0 58.0 60.0 62.0 76.0 10.0 76.0 78.0 0.0 76.0 19.0 73.0 69.0 67.0 63.0 67.0 19.0 75.0 16.0 37.0 76.0 0.0 76.0 60.0 57.0 59.0 58.0 60.0 77.0 20.0 78.0 79.0 19.0 76.0 0.0 #FASTA SCORE matrix of loop sequence - 14 20 15 14 13 3 13 4 10 8 4 - - 24 35 34 37 24 21 23 12 28 23 - - - 30 29 23 13 29 19 15 23 14 - - - - 40 38 28 31 28 18 38 29 - - - - - 33 23 26 26 13 33 24 - - - - - - 30 24 21 18 34 29 - - - - - - - 14 11 26 30 37 - - - - - - - - 14 16 24 15 - - - - - - - - - 1 21 12 - - - - - - - - - - 20 32 - - - - - - - - - - - 31 - - - - - - - - - - - - #FASTA SCORE matrix of motif sequence - 66 73 75 67 60 57 58 51 56 67 49 - - 86 99 81 100 86 76 79 74 95 66 - - - 100 79 76 73 87 83 71 88 57 - - - - 97 93 90 89 92 76 105 73 - - - - - 80 74 69 74 75 86 61 - - - - - - 95 73 68 75 100 69 - - - - - - - 71 65 86 103 85 - - - - - - - - 75 69 81 54 - - - - - - - - - 55 80 48 - - - - - - - - - - 81 73 - - - - - - - - - - - 79 - - - - - - - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 1093 1177 921 1090 218 501 199 250 488 188 502 - - 1100 885 1046 262 557 219 204 541 221 527 - - - 940 1143 272 521 284 234 529 261 527 - - - - 876 342 525 327 297 506 311 524 - - - - - 251 500 243 185 483 250 493 - - - - - - 73 598 475 50 575 49 - - - - - - - 54 22 1276 81 1110 - - - - - - - - 480 58 588 22 - - - - - - - - - 15 452 17 - - - - - - - - - - 62 1122 - - - - - - - - - - - 47 - - - - - - - - - - - -