#Head information NAME 9ba0 TYPE beta-alpha REPRESENTATIVE 1thm_97 MEMBERS 6 CLUSTER 1 #Loop element > 1thm_97 silavrVLDNSGSGTwtavangityaad.. 9ba0_0.pdb 0 > 1st3_87 elyavkVLGADGRGAissiaqglewagn.. 9ba0_1.pdb 0 > 1sca_88 slyavkVLNSSGSGSysgivsgiewatt.. 9ba0_2.pdb 0 > 1yja_89 slyavkVLGADGSGQyswiingiewaia.. 9ba0_3.pdb 0 > 1svn_87 elyavkVLGASGSGSvssiaqglewagn.. 9ba0_4.pdb 0 > 2prk_89 qlfgvkVLDDNGSGQystiiagmdfvasdk 9ba0_5.pdb 0 #Motif sequence SILAVRVLDNSGSGTWTAVANGITYAAD.. ELYAVKVLGADGRGAISSIAQGLEWAGN.. SLYAVKVLNSSGSGSYSGIVSGIEWATT.. SLYAVKVLGADGSGQYSWIINGIEWAIA.. ELYAVKVLGASGSGSVSSIAQGLEWAGN.. QLFGVKVLDDNGSGQYSTIIAGMDFVASDK #Loop sequence VLDNSGSGT VLGADGRGA VLNSSGSGS VLGADGSGQ VLGASGSGS VLDDNGSGQ #Fingerprint V L G A S G S G Q : : : : : : : : : : : : : : : : : S : : D D D : : : : : : : N : : : : A : : N S N : R : T #Geometry parameters DISTANCE 9.00 ( 0.22) Vector1 ( 0.04 0.59 0.81) Vector2 ( -0.54 -0.74 -0.40) Vector3 ( 0.57 0.14 0.81) Struc diversity(A) ( 0.7 0.8 0.7 1.3 1.5 1.1 1.8 0.8 0.6) #RMSD matrix of conformation of loops (A) 0.00 0.99 0.51 0.75 0.71 1.03 0.99 0.00 0.65 0.48 0.61 0.55 0.51 0.65 0.00 0.50 0.38 0.76 0.75 0.48 0.50 0.00 0.54 0.60 0.71 0.61 0.38 0.54 0.00 0.64 1.03 0.55 0.76 0.60 0.64 0.00 #Sequence identities difference matrix of loop (%) 0.0 56.0 33.0 44.0 33.0 33.0 56.0 0.0 56.0 22.0 33.0 56.0 33.0 56.0 0.0 44.0 22.0 44.0 44.0 22.0 44.0 0.0 22.0 33.0 33.0 33.0 22.0 22.0 0.0 44.0 33.0 56.0 44.0 33.0 44.0 0.0 #Sequence identities difference matrix of motif (%) 0.0 63.0 53.0 53.0 57.0 70.0 63.0 0.0 43.0 33.0 13.0 67.0 53.0 43.0 0.0 30.0 33.0 60.0 53.0 33.0 30.0 0.0 33.0 53.0 57.0 13.0 33.0 33.0 0.0 63.0 70.0 67.0 60.0 53.0 63.0 0.0 #Sequence identities difference matrix of global PDB chains (%) 0.0 53.0 55.0 57.0 52.0 65.0 53.0 0.0 40.0 40.0 2.0 65.0 55.0 40.0 0.0 29.0 38.0 65.0 57.0 40.0 29.0 0.0 40.0 64.0 52.0 2.0 38.0 40.0 0.0 65.0 65.0 65.0 65.0 64.0 65.0 0.0 #FASTA SCORE matrix of loop sequence - 23 41 28 36 41 - - 27 45 39 23 - - - 32 42 34 - - - - 44 37 - - - - - 29 - - - - - - #FASTA SCORE matrix of motif sequence - 63 87 74 76 76 - - 98 108 159 69 - - - 124 113 90 - - - - 107 89 - - - - - 75 - - - - - - #FASTA SCORE matrix of global PDB chain sequence - 763 763 684 773 499 - - 1058 1079 1689 461 - - - 1247 1076 452 - - - - 1079 471 - - - - - 471 - - - - - -